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graph-compression

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AriannaRigamonti / GraphCompression

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GraphCompression is a Python script for simplifying protein interaction networks. It retrieves interaction data from the STRING API using protein information or a user-provided dataset, constructs an interaction graph, and applies Spectral Clustering. The output is a condensed network saved as a graph image and CSV file.

bioinformatics networkx graph-theory protein-interaction network-analysis graph-compression biological-networks spectral-clustering
  • Updated Aug 31, 2024
  • Python

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