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lucblassel/README.md

Luc Blassel

Where to find me

work                         

Who am I?

PostDoc bioinformatics, I am interested in using machine learning to solve biological problems, more specifically on biological sequence data (DNA, amino acids, ...)

trophies

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  1. phylotree-rs Public

    Rust crate to deal with phylogenetic trees

    Rust 12 5

  2. website_projects Public

    code for projects on my website

    Python

  3. HIV-DRM-machine-learning Public

    This repo contains the data and software used to run the analyses in the "Using machine learning and Big data to explore the drug resistance landscape in HIV"

    Jupyter Notebook 5 2

  4. MSR_discovery Public

    finding mapping-friendly S2Dequence Reduction functions

    JavaScript

  5. utils_hiv Public

    Functions and scripts used in a pipeline to find novel drug resistance associated mutations in HIV pol-RT

    Python 1

  6. fastatools Public

    fasta file manipulation tools in one bash script

    Shell 3

428 contributions in the last year

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Activity overview

Contributed to lucanest/Phyloformer, lucblassel/phylotree-rs, lucblassel/lucblassel.hugo and 12 other repositories
Loading A graph representing lucblassel's contributions from March 10, 2024 to March 15, 2025. The contributions are 98% commits, 1% pull requests, 1% issues, 0% code review.

Contribution activity

March 2025

Created an issue in tracel-ai/burn that received 2 comments

Is there a way to do Pytorch's index_put ?

Firstly, thanks for all the hard work on burn, it's a really cool project! I am in the process of porting my PyTorch code to burn, and I am running…

2 comments
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