Fix dependencies to allow publish

[hendrikvanantwerpen]

The previous PR removed explicit versions for in-repo dependencies. I expected that cargo publish would just replace the path dependency with the current version, but instead it complains and aborts.

This PR restores the version numbers where required. (It seems not required for dev dependencies, which I verified using a local cargo publish --dry-run.)

I also removed the publish-npm workflow job, which would have failed since the NPM package has been removed.

[github-actions]

Performance Summary

Comparing base f715ed1 with head 9649181 on typescript_benchmark benchmark. For details see workflow artifacts. Note that performance is tested on the last commits with changes in stack-graphs, not on every commit.

Before

--------------------------------------------------------------------------------
Command:            base/target/release/tree-sitter-stack-graphs-typescript index -D base.sqlite --max-file-time=30 --hide-error-details -- base/data/typescript_benchmark
Massif arguments:   --massif-out-file=perf.out
ms_print arguments: --x=72 --y=12 base-perf-results/perf.out
--------------------------------------------------------------------------------


    GB
2.275^                                                   #                    
     |                                                   #                    
     |                                                  :#                    
     |                                               @@@:#                    
     |                                               @  :#                    
     |                                               @  :#                    
     |                                             ::@  :#                ::::
     |                                            :: @  :#                :: :
     |                                            :: @  :#                :: :
     |                                     @@  ::::: @  :#       ::   :::::: :
     |                     @@  @@         :@@: :: :: @  :#      ::: : ::  :: :
     |                     @@::@@: ::    ::@@:::: :: @  :#     ::::@::::  :: :
   0 +----------------------------------------------------------------------->Gi
     0                                                                   87.72

After

--------------------------------------------------------------------------------
Command:            head/target/release/tree-sitter-stack-graphs-typescript index -D head.sqlite --max-file-time=30 --hide-error-details -- head/data/typescript_benchmark
Massif arguments:   --massif-out-file=perf.out
ms_print arguments: --x=72 --y=12 head-perf-results/perf.out
--------------------------------------------------------------------------------


    GB
2.275^                                                  #                     
     |                                                  #                     
     |                                                 :#                     
     |                                              @@@:#                     
     |                                              @  :#                  :::
     |                                              @  :#                  : :
     |                                            ::@  :#                ::: :
     |                                           :: @  :#                : : :
     |                                           :: @  :#                : : :
     |                                     @  ::::: @  :#       ::  :::::: : :
     |                         :         ::@ ::: :: @  :#      ::: :::   : : :
     |                    @::::: : ::   :::@:::: :: @  :#     ::::@:::   : : :
   0 +----------------------------------------------------------------------->Gi
     0                                                                   89.70