Jupyter notebooks Prototypes for integrating semantics into NFID4Chem

Using Terminology Service and SPARQL endpoints

Create and start virtual environment python -m venv venv

source venv/bin/activate

Install dependencies: pip install -r requirements.txt

start jupyter notebook jupyter-notebook

Notebooks - Prototypes

Run Notebooks in the Browser via BINDER

• SPARQL Queries to ChEBI in triple store
• Chemistry Ontologies Explorer Displays the Network of borrowed terms for Chemistry ontologies
• RXNO Reaction Types Tree via Ontology Look Service (OLS) API
• SPARQL queries to Wikidata to enrich Chemotion data