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hlaAttrBagClass.Rd
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\name{hlaAttrBagClass}
\alias{hlaAttrBagClass}
\title{The class of HIBAG model}
\description{
The class of a HIBAG model, and its instance is returned from
\code{\link{hlaAttrBagging}}.
}
\value{
Return a list of:
\item{n.samp}{the total number of training samples}
\item{n.snp}{the total number of candidate SNP predictors}
\item{sample.id}{the sample IDs}
\item{snp.id}{the SNP IDs}
\item{snp.position}{SNP position in basepair}
\item{snp.allele}{a vector of characters with the format of
``A allele/B allele''}
\item{snp.allele.freq}{the allele frequencies}
\item{hla.locus}{the name of HLA locus}
\item{hla.allele}{the HLA alleles used in the model}
\item{hla.freq}{the HLA allele frequencies}
\item{assembly}{the human genome reference, such like "hg19"}
\item{model}{internal use}
\item{appendix}{an optional list:
\code{platform} -- supported platform(s);
\code{information} -- other information, like training sets, authors;
\code{warning} -- any warning message}
\item{matching}{matching proportion in the training set}
}
\author{Xiuwen Zheng}
\seealso{
\code{\link{hlaAttrBagging}}, \code{\link{hlaParallelAttrBagging}},
\code{\link{hlaAttrBagObj}}
}
\keyword{HLA}
\keyword{genetics}