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Starred repositories

7 stars written in Jupyter Notebook
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aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Jupyter Notebook 28,053 7,933 Updated Jun 25, 2024

Visualizations for machine learning datasets

Jupyter Notebook 7,375 887 Updated May 24, 2023

Extensible specification for representing and uniquely identifying biological sequence variation

Jupyter Notebook 94 38 Updated Jul 29, 2025

Extract networks of entities from journalistic reporting

Jupyter Notebook 48 4 Updated Jul 17, 2023

Benchmarking pairwise aligners

Jupyter Notebook 36 1 Updated Feb 8, 2025

link raw affiliation to ROR ids

Jupyter Notebook 30 4 Updated Jul 12, 2023

Developments in next generation sequencing: instruments, read lengths, throughput. See

Jupyter Notebook 27 14 Updated Apr 2, 2018