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series_methods.py
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from datetime import datetime
import numpy as np
import pandas.util.testing as tm
from pandas import Series, date_range, NaT
class SeriesConstructor:
params = [None, "dict"]
param_names = ["data"]
def setup(self, data):
self.idx = date_range(
start=datetime(2015, 10, 26), end=datetime(2016, 1, 1), freq="50s"
)
dict_data = dict(zip(self.idx, range(len(self.idx))))
self.data = None if data is None else dict_data
def time_constructor(self, data):
Series(data=self.data, index=self.idx)
class IsIn:
params = ["int64", "uint64", "object"]
param_names = ["dtype"]
def setup(self, dtype):
self.s = Series(np.random.randint(1, 10, 100000)).astype(dtype)
self.values = [1, 2]
def time_isin(self, dtypes):
self.s.isin(self.values)
class IsInFloat64:
def setup(self):
self.small = Series([1, 2], dtype=np.float64)
self.many_different_values = np.arange(10 ** 6, dtype=np.float64)
self.few_different_values = np.zeros(10 ** 7, dtype=np.float64)
self.only_nans_values = np.full(10 ** 7, np.nan, dtype=np.float64)
def time_isin_many_different(self):
# runtime is dominated by creation of the lookup-table
self.small.isin(self.many_different_values)
def time_isin_few_different(self):
# runtime is dominated by creation of the lookup-table
self.small.isin(self.few_different_values)
def time_isin_nan_values(self):
# runtime is dominated by creation of the lookup-table
self.small.isin(self.few_different_values)
class IsInForObjects:
def setup(self):
self.s_nans = Series(np.full(10 ** 4, np.nan)).astype(np.object)
self.vals_nans = np.full(10 ** 4, np.nan).astype(np.object)
self.s_short = Series(np.arange(2)).astype(np.object)
self.s_long = Series(np.arange(10 ** 5)).astype(np.object)
self.vals_short = np.arange(2).astype(np.object)
self.vals_long = np.arange(10 ** 5).astype(np.object)
# because of nans floats are special:
self.s_long_floats = Series(np.arange(10 ** 5, dtype=np.float)).astype(
np.object
)
self.vals_long_floats = np.arange(10 ** 5, dtype=np.float).astype(np.object)
def time_isin_nans(self):
# if nan-objects are different objects,
# this has the potential to trigger O(n^2) running time
self.s_nans.isin(self.vals_nans)
def time_isin_short_series_long_values(self):
# running time dominated by the preprocessing
self.s_short.isin(self.vals_long)
def time_isin_long_series_short_values(self):
# running time dominated by look-up
self.s_long.isin(self.vals_short)
def time_isin_long_series_long_values(self):
# no dominating part
self.s_long.isin(self.vals_long)
def time_isin_long_series_long_values_floats(self):
# no dominating part
self.s_long_floats.isin(self.vals_long_floats)
class NSort:
params = ["first", "last", "all"]
param_names = ["keep"]
def setup(self, keep):
self.s = Series(np.random.randint(1, 10, 100000))
def time_nlargest(self, keep):
self.s.nlargest(3, keep=keep)
def time_nsmallest(self, keep):
self.s.nsmallest(3, keep=keep)
class Dropna:
params = ["int", "datetime"]
param_names = ["dtype"]
def setup(self, dtype):
N = 10 ** 6
data = {
"int": np.random.randint(1, 10, N),
"datetime": date_range("2000-01-01", freq="S", periods=N),
}
self.s = Series(data[dtype])
if dtype == "datetime":
self.s[np.random.randint(1, N, 100)] = NaT
def time_dropna(self, dtype):
self.s.dropna()
class SearchSorted:
goal_time = 0.2
params = [
"int8",
"int16",
"int32",
"int64",
"uint8",
"uint16",
"uint32",
"uint64",
"float16",
"float32",
"float64",
"str",
]
param_names = ["dtype"]
def setup(self, dtype):
N = 10 ** 5
data = np.array([1] * N + [2] * N + [3] * N).astype(dtype)
self.s = Series(data)
def time_searchsorted(self, dtype):
key = "2" if dtype == "str" else 2
self.s.searchsorted(key)
class Map:
params = (["dict", "Series", "lambda"], ["object", "category", "int"])
param_names = "mapper"
def setup(self, mapper, dtype):
map_size = 1000
map_data = Series(map_size - np.arange(map_size), dtype=dtype)
# construct mapper
if mapper == "Series":
self.map_data = map_data
elif mapper == "dict":
self.map_data = map_data.to_dict()
elif mapper == "lambda":
map_dict = map_data.to_dict()
self.map_data = lambda x: map_dict[x]
else:
raise NotImplementedError
self.s = Series(np.random.randint(0, map_size, 10000), dtype=dtype)
def time_map(self, mapper, *args, **kwargs):
self.s.map(self.map_data)
class Clip:
params = [50, 1000, 10 ** 5]
param_names = ["n"]
def setup(self, n):
self.s = Series(np.random.randn(n))
def time_clip(self, n):
self.s.clip(0, 1)
class ValueCounts:
params = ["int", "uint", "float", "object"]
param_names = ["dtype"]
def setup(self, dtype):
self.s = Series(np.random.randint(0, 1000, size=100000)).astype(dtype)
def time_value_counts(self, dtype):
self.s.value_counts()
class Dir:
def setup(self):
self.s = Series(index=tm.makeStringIndex(10000))
def time_dir_strings(self):
dir(self.s)
class SeriesGetattr:
# https://github.com/pandas-dev/pandas/issues/19764
def setup(self):
self.s = Series(1, index=date_range("2012-01-01", freq="s", periods=int(1e6)))
def time_series_datetimeindex_repr(self):
getattr(self.s, "a", None)
class All(object):
params = [[10 ** 3, 10 ** 6], ["fast", "slow"]]
param_names = ["N", "case"]
def setup(self, N, case):
val = case != "fast"
self.s = Series([val] * N)
def time_all(self, N, case):
self.s.all()
class Any(object):
params = [[10 ** 3, 10 ** 6], ["fast", "slow"]]
param_names = ["N", "case"]
def setup(self, N, case):
val = case == "fast"
self.s = Series([val] * N)
def time_any(self, N, case):
self.s.any()
class NanOps(object):
params = [
[
"var",
"mean",
"median",
"max",
"min",
"sum",
"std",
"sem",
"argmax",
"skew",
"kurt",
"prod",
],
[10 ** 3, 10 ** 6],
["int8", "int32", "int64", "float64"],
]
param_names = ["func", "N", "dtype"]
def setup(self, func, N, dtype):
self.s = Series([1] * N, dtype=dtype)
self.func = getattr(self.s, func)
def time_func(self, func, N, dtype):
self.func()
from .pandas_vb_common import setup # noqa: F401