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[FIt-SNE](https://github.com/KlugerLab/FIt-SNE) - Fast Fourier Transform-accelerated Interpolation-based t-SNE.
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[umap](https://github.com/lmcinnes/umap) - Uniform Manifold Approximation and Projection, [talk](https://www.youtube.com/watch?v=nq6iPZVUxZU), [explorer](https://github.com/GrantCuster/umap-explorer), [explanation](https://pair-code.github.io/understanding-umap/).
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UMAP does not preserve global structure any better than t-SNE when using the same initialization - [paper](https://www.biorxiv.org/content/10.1101/2019.12.19.877522v1).
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[scikit-tda](https://github.com/scikit-tda/scikit-tda) - Topological Data Analysis, [paper](https://www.nature.com/articles/srep01236), [talk](https://www.youtube.com/watch?v=F2t_ytTLrQ4), [talk](https://www.youtube.com/watch?v=AWoeBzJd7uQ).
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