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references.bib
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% Encoding: UTF-8
%
% If available, include a DOI (preferred) *or* a URL for a given reference, but
# not both, as the DOI turns into a link which is redundant with the URL.
% MNE-C reference
@article{GramfortEtAl2014,
title = {{{MNE}} Software for Processing {{MEG}} and {{EEG}} Data},
author = {Gramfort, Alexandre and Luessi, Martin and Larson, Eric and Engemann, Denis A. and Strohmeier, Daniel and Brodbeck, Christian and Parkkonen, Lauri and H{\"a}m{\"a}l{\"a}inen, Matti S.},
year = {2014},
volume = {86},
pages = {446--460},
doi = {10.1016/j.neuroimage.2013.10.027},
journal = {NeuroImage},
}
% MNE-Python reference
@article{GramfortEtAl2013a,
title = {{{MEG}} and {{EEG}} Data Analysis with {{MNE}}-{{Python}}},
author = {Gramfort, Alexandre and Luessi, Martin and Larson, Eric and Engemann, Denis A. and Strohmeier, Daniel and Brodbeck, Christian and Goj, Roman and Jas, Mainak and Brooks, Teon and Parkkonen, Lauri and H{\"a}m{\"a}l{\"a}inen, Matti S.},
year = {2013},
volume = {7},
pages = {1--13},
doi = {10.3389/fnins.2013.00267},
journal = {Frontiers in Neuroscience},
number = {267}
}
% everything else
@article{AblinEtAl2018,
author = {Ablin, Pierre and Cardoso, Jean-Francois and Gramfort, Alexandre},
doi = {10.1109/TSP.2018.2844203},
journal = {IEEE Transactions on Signal Processing},
number = {15},
pages = {4040-4049},
title = {Faster {{Independent Component Analysis}} by Preconditioning with Hessian Approximations},
volume = {66},
year = {2018}
}
@article{AcunzoEtAl2012,
author = {Acunzo, David J. and MacKenzie, Graham and {van Rossum}, Mark C.W.},
doi = {10.1016/j.jneumeth.2012.06.011},
journal = {Journal of Neuroscience Methods},
number = {1},
pages = {212-218},
title = {Systematic Biases in Early {{ERP}} and {{ERF}} Components as a Result of High-Pass Filtering},
volume = {209},
year = {2012}
}
@article{Alday2019,
title = {How much baseline correction do we need in {ERP} research? Extended {GLM} model can replace baseline correction while lifting its limits},
author = {Alday, Phillip M.},
year = {2019},
volume = {56},
doi = {10.1111/psyp.13451},
journal = {Psychophysiology},
number = {12}
}
@article{ArtoniEtAl2018,
author = {Artoni, Fiorenzo and Delorme, Arnaud and Makeig, Scott},
doi = {10.1016/j.neuroimage.2018.03.016},
journal = {NeuroImage},
pages = {176-187},
title = {Applying Dimension Reduction to {{EEG}} Data by {{Principal Component Analysis}} Reduces the Quality of Its Subsequent {{Independent Component}} Decomposition},
volume = {175},
year = {2018}
}
@article{AvantsEtAl2008,
author = {Avants, Brian B. and Epstein, Charles L. and Grossman, Murray C. and Gee, James C.},
doi = {10.1016/j.media.2007.06.004},
journal = {Medical Image Analysis},
number = {1},
pages = {26-41},
shorttitle = {Symmetric Diffeomorphic Image Registration with Cross-Correlation},
title = {Symmetric Diffeomorphic Image Registration with Cross-Correlation: Evaluating Automated Labeling of Elderly and Neurodegenerative Brain},
volume = {12},
year = {2008}
}
@article{BailletEtAl2001,
author = {Baillet, Sylvain and Mosher, John C. and Leahy, Richard M.},
doi = {10.1109/79.962275},
journal = {IEEE Signal Processing Magazine},
number = {6},
pages = {14-30},
title = {Electromagnetic Brain Mapping},
volume = {18},
year = {2001}
}
@inproceedings{BarachantEtAl2010,
author = {Barachant, Alexandre and Bonnet, Stephane and Congedo, Marco and Jutten, Christian},
booktitle = {2010 IEEE International Workshop on Multimedia Signal Processing},
title = {Common Spatial Pattern revisited by {Riemannian} geometry},
year = {2010},
pages={472-476},
doi = {10.1109/MMSP.2010.5662067}
}
@book{Barber2012,
address = {{Cambridge}},
author = {Barber, David},
isbn = {978-0-521-51814-7},
publisher = {{Cambridge University Press}},
title = {Bayesian Reasoning and Machine Learning},
url = {http://www.cs.ucl.ac.uk/staff/d.barber/brml/},
year = {2012}
}
@inproceedings{BekhtiEtAl2016,
address = {{Trento}},
author = {Bekhti, Yousra and Strohmeier, Daniel and Jas, Mainak and Badeau, Roland and Gramfort, Alexandre},
booktitle = {Proceedings of {{PRNI}}-2016},
doi = {10.1109/PRNI.2016.7552337},
isbn = {978-1-4673-6530-7},
pages = {1-4},
publisher = {{IEEE}},
title = {M/{{EEG}} Source Localization with Multi-Scale Time-Frequency Dictionaries},
year = {2016}
}
@article{BellSejnowski1995,
author = {Bell, Anthony J. and Sejnowski, Terrence J.},
doi = {10.1162/neco.1995.7.6.1129},
journal = {Neural Computation},
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pages = {1129-1159},
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year = {1995}
}
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author = {Bentivoglio, Anna Rita and Bressman, Susan B. and Cassetta, Emanuele and Carretta, Donatella and Tonali, Pietro and Albanese, Alberto},
doi = {10.1002/mds.870120629},
journal = {Movement Disorders},
number = {6},
pages = {1028-1034},
title = {Analysis of Blink Rate Patterns in Normal Subjects},
volume = {12},
year = {1997}
}
@article{BergScherg1994,
author = {Berg, Patrick and Scherg, Michael},
doi = {10.1016/0013-4694(94)90113-9},
journal = {Electroencephalography and Clinical Neurophysiology},
number = {1},
pages = {58-64},
title = {A Fast Method for Forward Computation of Multiple-Shell Spherical Head Models},
volume = {90},
year = {1994}
}
@inproceedings{BigdelyShamloEtAl2013,
author = {Bigdely-Shamlo, Nima and Kreutz-Delgado, Kenneth and Robbins, Kay and Miyakoshi, Makoto and Westerfield, Marissa and Bel-Bahar, Tarik and Kothe, Christian and Hsi, Jessica and Makeig, Scott},
doi = {10.1109/GlobalSIP.2013.6736796},
booktitle = {2013 IEEE Global Conference on Signal and Information Processing},
pages = {1--4},
title = {Hierarchical event descriptor {(HED)} tags for analysis of event-related {EEG} studies},
organization = {IEEE},
year = {2013},
}
@article{BlankertzEtAl2008,
author = {Blankertz, Benjamin and Tomioka, Ryota and Lemm, Steven and Kawanabe, Motoaki and Müller, Klaus-Robert},
doi = {10.1109/MSP.2008.4408441},
journal = {IEEE Signal Processing Magazine},
number = {1},
pages = {41-56},
title = {Optimizing Spatial Filters for Robust {{EEG}} Single-Trial Analysis},
volume = {25},
year = {2008}
}
@article{Bookstein1989,
author = {Bookstein, Fred L.},
doi = {10.1109/34.24792},
journal = {IEEE Transactions on Pattern Analysis and Machine Intelligence},
number = {6},
pages = {567-585},
shorttitle = {Principal Warps},
title = {Principal Warps: Thin-Plate Splines and the Decomposition of Deformations},
volume = {11},
year = {1989}
}
@article{BrookesEtAl2008,
author = {Brookes, Matthew J. and Vrba, Jiri and Robinson, Stephen E. and Stevenson, Claire M. and Peters, Andrew M. and Barnes, Gareth R. and Hillebrand, Arjan and Morris, Peter G.},
doi = {10.1016/j.neuroimage.2007.09.050},
journal = {NeuroImage},
number = {4},
pages = {1788-1802},
title = {Optimising Experimental Design for {{MEG}} Beamformer Imaging},
volume = {39},
year = {2008}
}
@article{BrunaEtAl2018,
doi = {10.1088/1741-2552/aacfe4},
year = {2018},
publisher = {{IOP} Publishing},
volume = {15},
number = {5},
pages = {056011},
author = {Ricardo Bru{\~{n}}a, Fernando Maest{\'{u}}, Ernesto Pereda},
title = {Phase locking value revisited: teaching new tricks to an old dog},
journal = {Journal of Neural Engineering},
}
@techreport{BurdakovMerkulov2001,
title={On a new norm for data fitting and optimization problems},
author={Burdakov, Oleg and Merkulov, Boris},
number={LiTH-MAT-R-2001-29},
address={Link{\"o}ping},
institution={Link{\"o}ping University},
type = {Technical {{Report}}},
year={2001}
}
@article{CamposViolaEtAl2009,
author = {Campos Viola, Filipa and Thorne, Jeremy and Edmonds, Barrie and Schneider, Till and Eichele, Tom and Debener, Stefan},
doi = {10.1016/j.clinph.2009.01.015},
journal = {Clinical Neurophysiology},
number = {5},
pages = {868-877},
title = {Semi-Automatic Identification of Independent Components Representing {{EEG}} Artifact},
volume = {120},
year = {2009}
}
@article{ChambonEtAl2018,
author = {Chambon, Stanislas and Galtier, Mathieu N. and Arnal, Pierrick J. and Wainrib, Gilles and Gramfort, Alexandre},
doi = {10.1109/TNSRE.2018.2813138},
journal = {IEEE Transactions on Neural Systems and Rehabilitation Engineering},
number = {4},
pages = {758-769},
title = {A Deep Learning Architecture for Temporal Sleep Stage Classification Using Multivariate and Multimodal Time Series},
volume = {26},
year = {2018}
}
@article{ChenEtAl2010,
author = {Chen, Yilun and Wiesel, Ami and Eldar, Yonina C. and Hero, Alfred O.},
doi = {10.1109/TSP.2010.2053029},
journal = {IEEE Transactions on Signal Processing},
number = {10},
pages = {5016-5029},
title = {Shrinkage Algorithms for {{MMSE}} Covariance Estimation},
volume = {58},
year = {2010}
}
@article{CichyEtAl2014,
author = {Cichy, Radoslaw Martin and Pantazis, Dimitrios and Oliva, Aude},
doi = {10.1038/nn.3635},
journal = {Nature Neuroscience},
number = {3},
pages = {455-462},
title = {Resolving Human Object Recognition in Space and Time},
volume = {17},
year = {2014}
}
@book{Cohen2014,
place={Cambridge, MA},
title={Analyzing Neural Time Series Data: Theory and Practice},
publisher={MIT Press},
author={Cohen, Mike X.},
year={2014}
}
@article{Cohen2019,
author={Cohen, Michael X},
doi = {10.1016/j.neuroimage.2019.05.048},
journal = {NeuroImage},
pages = {81-86},
title = {A better way to define and describe {Morlet} wavelets for time-frequency analysis},
volume = {199},
year = {2019}
}
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author = {Cohen, David and Hosaka, Hidehiro},
doi = {10.1016/S0022-0736(76)80041-6},
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author = {Crosse, Michael J. and Di Liberto, Giovanni M. and Bednar, Adam and Lalor, Edmund C.},
doi = {10.3389/fnhum.2016.00604},
journal = {Frontiers in Human Neuroscience},
shorttitle = {The Multivariate Temporal Response Function ({{mTRF}}) Toolbox},
title = {The Multivariate Temporal Response Function ({{mTRF}}) Toolbox: A {{MATLAB}} Toolbox for Relating Neural Signals to Continuous Stimuli},
volume = {10},
year = {2016}
}
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author = {Dähne, Sven and Meinecke, Frank C. and Haufe, Stefan and Höhne, Johannes and Tangermann, Michael and Müller, Klaus-Robert and Nikulin, Vadim V.},
doi = {10.1016/j.neuroimage.2013.07.079},
journal = {NeuroImage},
pages = {111-122},
shorttitle = {{{SPoC}}},
title = {{{SPoC}}: A Novel Framework for Relating the Amplitude of Neuronal Oscillations to Behaviorally Relevant Parameters},
volume = {86},
year = {2014}
}
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author = {Dalal, Sarang S. and Guggisberg, Adrian G. and Edwards, Erik and Sekihara, Kensuke and Findlay, Anne M. and Canolty, Ryan T. and Berger, Mitchel S. and Knight, Robert T. and Barbaro, Nicholas M. and Kirsch, Heidi E. and Nagarajan, Srikantan S.},
doi = {10.1016/j.neuroimage.2008.01.023},
journal = {NeuroImage},
number = {4},
pages = {1686-1700},
shorttitle = {Five-Dimensional Neuroimaging},
title = {Five-Dimensional Neuroimaging: Localization of the Time–Frequency Dynamics of Cortical Activity},
volume = {40},
year = {2008}
}
@article{DaleEtAl1999,
author = {Dale, Anders M. and Fischl, Bruce and Sereno, Martin I.},
doi = {10.1006/nimg.1998.0395},
journal = {NeuroImage},
number = {2},
pages = {179-194},
title = {Cortical Surface-Based Analysis: {{I}}. Segmentation and Surface Reconstruction},
volume = {9},
year = {1999}
}
@article{DaleEtAl2000,
author = {Dale, Anders M. and Liu, Arthur K. and Fischl, Bruce R. and Buckner, Randy L. and Belliveau, John W. and Lewine, Jeffrey D. and Halgren, Eric},
doi = {10.1016/S0896-6273(00)81138-1},
journal = {Neuron},
number = {1},
pages = {55-67},
title = {Dynamic Statistical Parametric Mapping: Combining {{fMRI}} and {{MEG}} for High-Resolution Imaging of Cortical Activity},
volume = {26},
year = {2000}
}
@article{DaleSereno1993,
author = {Dale, Anders M. and Sereno, Martin I.},
doi = {10.1162/jocn.1993.5.2.162},
journal = {Journal of Cognitive Neuroscience},
number = {2},
pages = {162-176},
shorttitle = {Improved Localization of Cortical Activity by Combining {{EEG}} and {{MEG}} with {{MRI}} Cortical Surface Reconstruction},
title = {Improved Localization of Cortical Activity by Combining {{EEG}} and {{MEG}} with {{MRI}} Cortical Surface Reconstruction: A Linear Approach},
volume = {5},
year = {1993}
}
@article{DammersEtAl2008,
author = {Dammers, Jürgen and Schiek, Michael and Boers, Frank and Silex, Carmen and Zvyagintsev, Mikhail and Pietrzyk, Uwe and Mathiak, Klaus},
doi = {10.1109/TBME.2008.926677},
journal = {IEEE Transactions on Biomedical Engineering},
number = {10},
pages = {2353-2362},
title = {Integration of Amplitude and Phase Statistics for Complete Artifact Removal in Independent Components of Neuromagnetic Recordings},
volume = {55},
year = {2008}
}
@article{DarvasEtAl2006,
author = {Darvas, Felix and Ermer, John J. and Mosher, John C. and Leahy, Richard M.},
doi = {10.1002/hbm.20171},
journal = {Human Brain Mapping},
number = {2},
pages = {129-143},
title = {Generic Head Models for Atlas-Based {{EEG}} Source Analysis},
volume = {27},
year = {2006}
}
@article{DelormeMakeig2004,
title = {{EEGLAB}: an open source toolbox for analysis of single-trial {EEG} dynamics including independent component analysis},
volume = {134},
issn = {0165-0270},
shorttitle = {{EEGLAB}},
doi = {10.1016/j.jneumeth.2003.10.009},
language = {eng},
number = {1},
journal = {Journal of Neuroscience Methods},
author = {Delorme, Arnaud and Makeig, Scott},
month = mar,
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