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PCAngsd, which estimates the covariance matrix for low depth NGS data in an iterative procedure based on genotype likelihoods and is able to perform multiple population genetic analyses in heterogeneous populations.
homepage: http://www.popgen.dk/software/index.php/PCAngsd
| version | versionsuffix | toolchain |
|---|---|---|
0.97 |
-Python-2.7.14 |
foss/2018a |
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