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Time-Points #2

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KinaTech opened this issue Jan 12, 2021 · 0 comments
Open

Time-Points #2

KinaTech opened this issue Jan 12, 2021 · 0 comments

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@KinaTech
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KinaTech commented Jan 12, 2021

Hi both @jtnachbar @faiazrahman
I am trying to train/test your model on the scans you shared (I think we have three patients in the directory).
For each patient you have selected three time-points, each has the size (200,200,150).
But when you call each patient, why you have 10 available time-point for each patient (batch_size=1, 10, 200, 200,150)
So then you select 3 out of 10 in line 130 of your code.
single_patient_MRIs = patient_MRIs[x][:patient_markers[x]].view(-1, 1, data_shape[0], data_shape[1], data_shape[2])

Is this 3 refer to the different time-point? How you select 3 out of 10?
what does the 'patient_markers' means?

Thanks

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